Peptide-Information

General Information

SPKB ID SPKB06222

Signal sequence KGGSLSFLFVLLIATITSVIC

Length 21

Organism Arabidopsis thaliana (Mouse-ear cress)

UniProt ID NA,

Motif 1..21

Activity Information

Pathway SRP-dependent

Natural/Artificial Natural

Subcellular location ER

Secretion efficiency NA

Type Sec/SPI

Structure Information

PDB ID NA,

Predicted Structure ID SPKB06222.cif

Structure SPKB06222.cif

Very high (pLDDT > 90)

Confident (90 > pLDDT > 70)

Low (70 > pLDDT > 50)

Very low (pLDDT < 50)

Loading PAE…

Expected Position Error (Ångströms)

Physicochemical Information

Molecular weight 2182.68974

Aliphatic index 162.3809524

Isoelectric point 8.545189979

Charge (pH=7) 0.93571455

Topological polar surface area 772.49

Aromaticity 0.095238095

Average rotatable bonds 3.380952381

Number of hydrogen bond donors 29

Number of hydrogen bond acceptors 29

X logP energy -4.7056

Hydropathy

Literature Information

Title Yeast-based reporter assay system for identifying the requirements of intramembrane proteolysis by signal peptide peptidase of Arabidopsis thaliana

DOI 10.1002/2211-5463.12936,

Publication Year 2020

PubMed ID 32686366,

Patent ID NA,