Peptide-Information

General Information

SPKB ID SPKB06221

Signal sequence EGVTVVSFFLLFIATAMA

Length 18

Organism Arabidopsis thaliana (Mouse-ear cress)

UniProt ID NA,

Motif 1..18

Activity Information

Pathway SRP-dependent

Natural/Artificial Natural

Subcellular location ER

Secretion efficiency NA

Type Sec/SPI

Structure Information

PDB ID NA,

Predicted Structure ID SPKB06221.cif

Structure SPKB06221.cif

Very high (pLDDT > 90)

Confident (90 > pLDDT > 70)

Low (70 > pLDDT > 50)

Very low (pLDDT < 50)

Loading PAE…

Expected Position Error (Ångströms)

Physicochemical Information

Molecular weight 1916.30584

Aliphatic index 130

Isoelectric point 3.849983241

Charge (pH=7) -1.000240578

Topological polar surface area 656.01

Aromaticity 0.166666667

Average rotatable bonds 3.277777778

Number of hydrogen bond donors 23

Number of hydrogen bond acceptors 24

X logP energy -2.4628

Hydropathy

Literature Information

Title Yeast-based reporter assay system for identifying the requirements of intramembrane proteolysis by signal peptide peptidase of Arabidopsis thaliana

DOI 10.1002/2211-5463.12936,

Publication Year 2020

PubMed ID 32686366,

Patent ID NA,