Peptide-Information

General Information

SPKB ID SPKB06218

Signal sequence GYTNVSILLGLLMVFVTPMVFA

Length 22

Organism Arabidopsis thaliana (Mouse-ear cress)

UniProt ID NA,

Motif 1..22

Activity Information

Pathway SRP-dependent

Natural/Artificial Natural

Subcellular location ER

Secretion efficiency NA

Type Sec/SPI

Structure Information

PDB ID NA,

Predicted Structure ID SPKB06218.cif

Structure SPKB06218.cif

Very high (pLDDT > 90)

Confident (90 > pLDDT > 70)

Low (70 > pLDDT > 50)

Very low (pLDDT < 50)

Loading PAE…

Expected Position Error (Ångströms)

Physicochemical Information

Molecular weight 2385.94854

Aliphatic index 145.9090909

Isoelectric point 6.093198033

Charge (pH=7) -0.002866115

Topological polar surface area 789.64

Aromaticity 0.136363636

Average rotatable bonds 3.318181818

Number of hydrogen bond donors 27

Number of hydrogen bond acceptors 30

X logP energy -2.2083

Hydropathy

Literature Information

Title Yeast-based reporter assay system for identifying the requirements of intramembrane proteolysis by signal peptide peptidase of Arabidopsis thaliana

DOI 10.1002/2211-5463.12936,

Publication Year 2020

PubMed ID 32686366,

Patent ID NA,