SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06094

Signal sequence   MGYFRCARAGSFGRRRKMEPSTAARAWALFWLLLPLLGAVCA

Length  42

Organism  Homo sapiens (Human)

UniProt ID  NA,

Motif  1..42



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  8B6L,

Predicted Structure ID  SPKB06094.cif

Structure  SPKB06094.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4702.64674

Aliphatic index  81.66666667

Isoelectric point  11.85141591

Charge (pH=7)   5.874644674

Topological polar surface area  1786.06

Aromaticity  0.142857143

Average rotatable bonds  3.523809524

Number of hydrogen bond donors  69

Number of hydrogen bond acceptors  59

X logP energy  -12.66608

Hydropathy 



Literature Information


Title  Proteomics reveals signal peptide features determining the client specificity in human TRAP-dependent ER protein import

DOI  10.1038/s41467-018-06188-z,

Publication Year  2018

PubMed ID  30217974,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.