SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06078

Signal sequence   MAARWRFWCVSVTMVVALLIVCDVPSASA

Length  29

Organism  Homo sapiens (Human)

UniProt ID  NA,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  6S7T,

Predicted Structure ID  SPKB06078.cif

Structure  SPKB06078.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3182.86884

Aliphatic index  117.5862069

Isoelectric point  8.231404231

Charge (pH=7)   0.874474729

Topological polar surface area  1142.93

Aromaticity  0.103448276

Average rotatable bonds  3.310344828

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  41

X logP energy  -6.93186

Hydropathy 



Literature Information


Title  Proteomics reveals signal peptide features determining the client specificity in human TRAP-dependent ER protein import

DOI  10.1038/s41467-018-06188-z,

Publication Year  2018

PubMed ID  30217974,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.