SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06070

Signal sequence   MPGRAPLRTVPGALGAWLLGGLWAWTLCGLCSLGAVG

Length  37

Organism  Homo sapiens (Human)

UniProt ID  NA,

Motif  1..37



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06070.cif

Structure  SPKB06070.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3722.48814

Aliphatic index  113.5135135

Isoelectric point  8.834915637

Charge (pH=7)   1.874028245

Topological polar surface area  1316.41

Aromaticity  0.081081081

Average rotatable bonds  2.972972973

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  46

X logP energy  -8.73366

Hydropathy 



Literature Information


Title  Proteomics reveals signal peptide features determining the client specificity in human TRAP-dependent ER protein import

DOI  10.1038/s41467-018-06188-z,

Publication Year  2018

PubMed ID  30217974,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.