SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06067

Signal sequence   MQFSLATIATVAAAVSA

Length  17

Organism  Yarrowia lipolytica

UniProt ID  Q6CAV7,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06067.cif

Structure  SPKB06067.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1651.93854

Aliphatic index  115.2941176

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  652.93

Aromaticity  0.058823529

Average rotatable bonds  3

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  24

X logP energy  -7.3138

Hydropathy 



Literature Information


Title  In silico and in vivo analysis of signal peptides effect on recombinant glucose oxidase production in nonconventional yeast Yarrowia lipolytica

DOI  10.1007/s11274-018-2512-x,

Publication Year  2018

PubMed ID  30083963,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.