SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06048

Signal sequence   MMGMSCMLVVSVTLFFSFLTRKRKAHH

Length  27

Organism  Bacillus subtilis DB104

UniProt ID  NA,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06048.cif

Structure  SPKB06048.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3158.91114

Aliphatic index  79.2592592592593

Isoelectric point  11.6516079260036

Charge (pH=7)   4.11723107498106

Topological polar surface area  1154.27

Aromaticity  0.111111111111111

Average rotatable bonds  3.92592592592593

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  44

X logP energy  -8.11435999999999

Hydropathy 



Literature Information


Title  Signal Peptide Efficiency: From High-Throughput Data to Prediction and Explanation

DOI  10.1021/acssynbio.2c00328,

Publication Year  2023

PubMed ID  36649479,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.