SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05984

Signal sequence   MKKAKAIFLFILIVSGFLLVAC

Length  22

Organism  Escherichia coli

UniProt ID  NA,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cytoplasmic membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05984.cif

Structure  SPKB05984.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2426.14624

Aliphatic index  164.0909091

Isoelectric point  10.51301932

Charge (pH=7)   2.935124482

Topological polar surface area  772.71

Aromaticity  0.136363636

Average rotatable bonds  3.727272727

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  0.6952

Hydropathy 



Literature Information


Title  A lipoprotein signal peptide plus a cysteine residue at the amino-terminal end of the periplasmic protein beta-lactamase is sufficient for its lipid modification, processing and membrane localization in Escherichia coli

DOI  10.1111/j.1574-6968.1993.tb06127.x,

Publication Year  1993

PubMed ID  8514122,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.