SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05955

Signal sequence   MSIKASLKDVGVVVAATAAAGILAGNAMA

Length  29

Organism  Silene pratensis

UniProt ID  NA,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05955.cif

Structure  SPKB05955.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2701.23544

Aliphatic index  124.8275862

Isoelectric point  9.537297863

Charge (pH=7)   0.997840716

Topological polar surface area  1071.24

Aromaticity  0

Average rotatable bonds  3.103448276

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  39

X logP energy  -11.6659

Hydropathy 



Literature Information


Title  Role of signal peptides in targeting of proteins in cyanobacteria

DOI  10.1128/jb.176.7.1857-1864.1994,

Publication Year  1994

PubMed ID  8144451,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.