SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05814

Signal sequence   MKKVMMLALALGASTSLA

Length  18

Organism  Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)

UniProt ID  Q9RU24,

Motif  1..18



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05814.cif

Structure  SPKB05814.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1836.34004

Aliphatic index  125

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  670.75

Aromaticity  0

Average rotatable bonds  3.555555556

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  27

X logP energy  -4.926

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.