SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05811

Signal sequence   AFLLAATLTISSHMQEAGA

Length  19

Organism  Juniperus virginiana (Eastern redcedar) (Sabina virginiana)

UniProt ID  Q9LD79,

Motif  <1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05811.cif

Structure  SPKB05811.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1932.22184

Aliphatic index  108.4210526

Isoelectric point  5.363507222

Charge (pH=7)   -0.909331487

Topological polar surface area  777.11

Aromaticity  0.052631579

Average rotatable bonds  3.263157895

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  28

X logP energy  -8.1219

Hydropathy 



Literature Information


Title  Identification of mutations in the genes for the pollen allergens of eastern red cedar (Juniperus virginiana).

DOI  10.1046/j.1365-2222.2001.01079.x,

Publication Year  2001

PubMed ID  11422137,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.