SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05806

Signal sequence   MCRYALIVLVVVVVATNLSEA

Length  21

Organism  Pimpla hypochondriaca (Parasitoid wasp)

UniProt ID  Q8T0W5,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05806.cif

Structure  SPKB05806.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2263.78234

Aliphatic index  171.4285714

Isoelectric point  6.229383416

Charge (pH=7)   -0.063069019

Topological polar surface area  848.3

Aromaticity  0.047619048

Average rotatable bonds  3.428571429

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -4.71783

Hydropathy 



Literature Information


Title  Towards a comprehensive view of the primary structure of venom proteins from the parasitoid wasp Pimpla hypochondriaca.

DOI  10.1016/j.ibmb.2004.03.003,

Publication Year  2004

PubMed ID  15147757,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.