SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05805

Signal sequence   MRKPITLILVVALALVLLATSEVSA

Length  25

Organism  Pimpla hypochondriaca (Parasitoid wasp)

UniProt ID  Q8T0W3,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05805.cif

Structure  SPKB05805.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2622.28904

Aliphatic index  187.2

Isoelectric point  9.695027686

Charge (pH=7)   0.999461077

Topological polar surface area  959.07

Aromaticity  0

Average rotatable bonds  3.44

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  34

X logP energy  -4.63153

Hydropathy 



Literature Information


Title  Towards a comprehensive view of the primary structure of venom proteins from the parasitoid wasp Pimpla hypochondriaca.

DOI  10.1016/j.ibmb.2004.03.003,

Publication Year  2004

PubMed ID  15147757,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.