SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05795

Signal sequence   MKIISCKSIIVSSLLALSATATA

Length  23

Organism  Pseudomonas alginovora

UniProt ID  Q59639,

Motif  1..23



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05795.cif

Structure  SPKB05795.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2321.85964

Aliphatic index  148.6956522

Isoelectric point  9.676237541

Charge (pH=7)   1.935419516

Topological polar surface area  897.17

Aromaticity  0

Average rotatable bonds  3.434782609

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  35

X logP energy  -9.2138

Hydropathy 



Literature Information


Title  Cloning, sequencing and overexpression in Escherichia coli of the alginatelyase-encoding aly gene of Pseudomonas alginovora: identification of three classes of alginate lyases.

DOI  10.1042/bj3190575,

Publication Year  1996

PubMed ID  8912697,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.