SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05784

Signal sequence   MNYRELFTGGLSAATVCACSLLVSGAVVA

Length  29

Organism  Anaplasma marginale

UniProt ID  Q07408,

Motif  1..29



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05784.cif

Structure  SPKB05784.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2904.40734

Aliphatic index  111.0344828

Isoelectric point  6.133775205

Charge (pH=7)   -0.125043735

Topological polar surface area  1141.79

Aromaticity  0.068965517

Average rotatable bonds  3.172413793

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  42

X logP energy  -12.67953

Hydropathy 



Literature Information


Title  Derivation of the complete msp4 gene sequence of Anaplasma marginale without cloning.

DOI  10.1016/0378-1119(93)90482-i,

Publication Year  1993

PubMed ID  8294020,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.