SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05780

Signal sequence   MKPAIVILCLFVASLYA

Length  17

Organism  Bombyx mori (Silk moth)

UniProt ID  Q00802,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05780.cif

Structure  SPKB05780.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1852.36684

Aliphatic index  166.4705882

Isoelectric point  8.522939048

Charge (pH=7)   0.934864135

Topological polar surface area  586.61

Aromaticity  0.117647059

Average rotatable bonds  3.352941176

Number of hydrogen bond donors  21

Number of hydrogen bond acceptors  23

X logP energy  0.2587

Hydropathy 



Literature Information


Title  Two crystal structures of Bombyx mori lipoprotein 3 - structural characterization of a new 30-kDa lipoprotein family member.

DOI  10.1371/journal.pone.0061303,

Publication Year  2013

PubMed ID  23613829,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.