SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05754

Signal sequence   MIKSNLVISSLAIVSSMSYA

Length  20

Organism  Photobacterium sp. (strain ATCC 43367)

UniProt ID  P39049,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05754.cif

Structure  SPKB05754.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2114.54334

Aliphatic index  136.5

Isoelectric point  9.298300651

Charge (pH=7)   0.996838851

Topological polar surface area  826.94

Aromaticity  0.05

Average rotatable bonds  3.55

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  32

X logP energy  -8.3955

Hydropathy 



Literature Information


Title  Sequence of a gene encoding a (poly ManA) alginate lyase active on Pseudomonas aeruginosa alginate.

DOI  10.1111/j.1574-6968.1993.tb06302.x,

Publication Year  1993

PubMed ID  8319887,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.