SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05743

Signal sequence   MKRLFLSFVALALLAGSIAA

Length  20

Organism  Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

UniProt ID  P17323,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05743.cif

Structure  SPKB05743.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2092.61394

Aliphatic index  156.5

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  744.6

Aromaticity  0.1

Average rotatable bonds  3.45

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  26

X logP energy  -3.11163

Hydropathy 



Literature Information


Title  A lipopeptide-encoding sequence upstream from the lysA gene of Pseudomonas aeruginosa.

DOI  10.1111/j.1365-2958.1990.tb00637.x,

Publication Year  1990

PubMed ID  2112674,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.