SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05693

Signal sequence   MARGMKLACVVLVMCMVVIAPMAEG

Length  25

Organism  Lens culinaris (Lentil) (Cicer lens)

UniProt ID  A0AT32,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05693.cif

Structure  SPKB05693.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2624.40984

Aliphatic index  120.8

Isoelectric point  8.22970453

Charge (pH=7)   0.875511645

Topological polar surface area  878.15

Aromaticity  0

Average rotatable bonds  3.48

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  36

X logP energy  -3.81743

Hydropathy 



Literature Information


Title  Purification and primary structure of novel lipid transfer proteins from germinated lentil (Lens culinaris) seeds.

DOI  10.1134/s0006297907040104,

Publication Year  2007

PubMed ID  17511608,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.