SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05674

Signal sequence   MARSSAVCFLLLLAFLIGTASA

Length  22

Organism  Lilium longiflorum (Trumpet lily)

UniProt ID  Q9SW93,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05674.cif

Structure  SPKB05674.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2255.76194

Aliphatic index  142.2727273

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  817.24

Aromaticity  0.090909091

Average rotatable bonds  3.272727273

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -5.96813

Hydropathy 



Literature Information


Title  A lipid transfer-like protein is necessary for lily pollen tube adhesion to an in vitro stylar matrix.

DOI  10.1105/tpc.12.1.151,

Publication Year  2000

PubMed ID  10634914,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.