SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05670

Signal sequence   MQGSMRLWLSVLTFTLSLLICLGTLADA

Length  28

Organism  Typhlonectes natans (Rubber eel)

UniProt ID  Q9PW68,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05670.cif

Structure  SPKB05670.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3054.71434

Aliphatic index  142.8571429

Isoelectric point  6.161167719

Charge (pH=7)   -0.063547244

Topological polar surface area  1128.48

Aromaticity  0.071428571

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  41

X logP energy  -7.61313

Hydropathy 



Literature Information


Title  Characterization and distribution of neuropeptide Y in the brain of a caecilian amphibian.

DOI  10.1016/s0196-9781(01)00334-5,

Publication Year  2001

PubMed ID  11287086,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.