SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05664

Signal sequence   MASPCLIAFLVFLCAIVSCCS

Length  21

Organism  Juniperus virginiana (Eastern redcedar) (Sabina virginiana)

UniProt ID  Q9LLT1,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05664.cif

Structure  SPKB05664.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2191.76614

Aliphatic index  134.7619048

Isoelectric point  5.708288991

Charge (pH=7)   -0.249914564

Topological polar surface area  697.22

Aromaticity  0.095238095

Average rotatable bonds  3.142857143

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  -3.8627

Hydropathy 



Literature Information


Title  Identification of mutations in the genes for the pollen allergens of eastern red cedar (Juniperus virginiana).

DOI  10.1046/j.1365-2222.2001.01079.x,

Publication Year  2001

PubMed ID  11422137,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.