SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05645

Signal sequence   MSKIILAIFLIVLCGLIFVTVDA

Length  23

Organism  Cotesia rubecula (Cabbage white butterfly parasite) (Apanteles rubecula)

UniProt ID  Q8WQK0,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05645.cif

Structure  SPKB05645.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2493.18774

Aliphatic index  199.1304348

Isoelectric point  6.160569088

Charge (pH=7)   -0.063838966

Topological polar surface area  807.3

Aromaticity  0.086956522

Average rotatable bonds  3.565217391

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  0.2631

Hydropathy 



Literature Information


Title  Isolation and characterization of a novel venom protein from an endoparasitoid, Cotesia rubecula (Hym: Braconidae).

DOI  10.1002/arch.10088,

Publication Year  2003

PubMed ID  12761876,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.