SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05629

Signal sequence   MIVFILLSLAAVLRQSFG

Length  18

Organism  Rhabdophis tigrinus tigrinus (Tiger keelback snake)

UniProt ID  Q8JGT9,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05629.cif

Structure  SPKB05629.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1978.46674

Aliphatic index  173.3333333

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  703.47

Aromaticity  0.111111111

Average rotatable bonds  3.611111111

Number of hydrogen bond donors  25

Number of hydrogen bond acceptors  24

X logP energy  -2.34843

Hydropathy 



Literature Information


Title  Cloning and characterization of novel snake venom proteins that block smooth muscle contraction.

DOI  10.1046/j.1432-1033.2002.02940.x,

Publication Year  2002

PubMed ID  12047379,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.