SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05627

Signal sequence   MVAVTSLGKALTALSILASLAVA

Length  23

Organism  Geotrichum sp. (strain M128)

UniProt ID  Q8J0D2,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05627.cif

Structure  SPKB05627.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2200.70564

Aliphatic index  165.6521739

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  830.69

Aromaticity  0

Average rotatable bonds  3.130434783

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  31

X logP energy  -7.3201

Hydropathy 



Literature Information


Title  Purification, characterization, cloning, and expression of a novel xyloglucan-specific glycosidase, oligoxyloglucan reducing end-specific cellobiohydrolase.

DOI  10.1074/jbc.M208443200,

Publication Year  2002

PubMed ID  12374797,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.