SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05619

Signal sequence   MCVQTRMLVAVAVVLVVLAVLSDPVSA

Length  27

Organism  Procambarus clarkii (Red swamp crayfish)

UniProt ID  Q867W1,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05619.cif

Structure  SPKB05619.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2784.47044

Aliphatic index  169.2592593

Isoelectric point  6.161167719

Charge (pH=7)   -0.063547244

Topological polar surface area  1014.11

Aromaticity  0

Average rotatable bonds  3.259259259

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  37

X logP energy  -6.51783

Hydropathy 



Literature Information


Title  Identification of GYRKPPFNGSIFamide (crustacean-SIFamide) in the crayfish Procambarus clarkii by topological mass spectrometry analysis.

DOI  10.1016/j.ygcen.2003.10.001,

Publication Year  2004

PubMed ID  14723891,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.