SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05545

Signal sequence   MAGFSKVVATIFLMMLLVFATDMMAEA

Length  27

Organism  Capsicum annuum (Capsicum pepper)

UniProt ID  Q43413,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05545.cif

Structure  SPKB05545.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2939.65594

Aliphatic index  108.5185185

Isoelectric point  4.18440752

Charge (pH=7)   -1.000089128

Topological polar surface area  981.23

Aromaticity  0.111111111

Average rotatable bonds  3.592592593

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  39

X logP energy  -3.3976

Hydropathy 



Literature Information


Title  Fruit-specific expression of a defensin-type gene family in bell pepper. Upregulation during ripening and upon wounding.

DOI  10.1104/pp.112.2.615,

Publication Year  1996

PubMed ID  8883377,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.