SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05534

Signal sequence   MGRFISVSFGLLVVFLSLSGTGA

Length  23

Organism  Daboia siamensis (Eastern Russel's viper) (Daboia russelii siamensis)

UniProt ID  Q38L02,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05534.cif

Structure  SPKB05534.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2358.82424

Aliphatic index  126.9565217

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  866.57

Aromaticity  0.130434783

Average rotatable bonds  3.304347826

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  31

X logP energy  -7.09763

Hydropathy 



Literature Information


Title  Characterization and molecular cloning of dabocetin, a potent antiplatelet C-type lectin-like protein from Daboia russellii siamensis venom.

DOI  10.1016/j.toxicon.2005.10.002,

Publication Year  2006

PubMed ID  16330060,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.