SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05526

Signal sequence   MAFHSLLLLCLAGLAFVSETAA

Length  22

Organism  Macropus giganteus (Eastern gray kangaroo)

UniProt ID  Q29616,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05526.cif

Structure  SPKB05526.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2278.75284

Aliphatic index  142.2727273

Isoelectric point  5.36107726

Charge (pH=7)   -0.971306203

Topological polar surface area  801.09

Aromaticity  0.090909091

Average rotatable bonds  3.272727273

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -4.3931

Hydropathy 



Literature Information


Title  Transthyretin expression evolved more recently in liver than in brain.

DOI  10.1016/0305-0491(93)90235-w,

Publication Year  1993

PubMed ID  8359020,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.