SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05486

Signal sequence   MYEAGKRASFMGGAGIWILALSVLMHVVCS

Length  30

Organism  Tamias sibiricus (Siberian chipmunk) (Eutamias sibiricus)

UniProt ID  Q06577,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05486.cif

Structure  SPKB05486.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3198.86804

Aliphatic index  107.3333333

Isoelectric point  8.530469743

Charge (pH=7)   1.027545038

Topological polar surface area  1157.83

Aromaticity  0.1

Average rotatable bonds  3.466666667

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  43

X logP energy  -7.43493

Hydropathy 



Literature Information


Title  Identification of novel blood proteins specific for mammalian hibernation.

DOI  NA,

Publication Year  1992

PubMed ID  1730610,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.