SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05484

Signal sequence   MTDVWRLAIFVLMVNVLNDQVSC

Length  23

Organism  Tamias sibiricus (Siberian chipmunk) (Eutamias sibiricus)

UniProt ID  Q06575,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05484.cif

Structure  SPKB05484.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2667.19474

Aliphatic index  135.2173913

Isoelectric point  4.10922387

Charge (pH=7)   -1.06310076

Topological polar surface area  1025.54

Aromaticity  0.086956522

Average rotatable bonds  3.739130435

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -6.44703

Hydropathy 



Literature Information


Title  Identification of novel blood proteins specific for mammalian hibernation.

DOI  NA,

Publication Year  1992

PubMed ID  1730610,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.