SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05476

Signal sequence   MGMRTKLSLAIFFFFLLALFSNLAFGKCK

Length  29

Organism  Glycine max (Soybean) (Glycine hispida)

UniProt ID  Q04672,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05476.cif

Structure  SPKB05476.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3316.12994

Aliphatic index  104.4827586

Isoelectric point  11.08111025

Charge (pH=7)   3.935121171

Topological polar surface area  1121.86

Aromaticity  0.206896552

Average rotatable bonds  3.827586207

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  41

X logP energy  -3.59883

Hydropathy 



Literature Information


Title  A 62-kD sucrose binding protein is expressed and localized in tissues actively engaged in sucrose transport.

DOI  10.1105/tpc.4.12.1561,

Publication Year  1992

PubMed ID  1467654,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.