SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05470

Signal sequence   MVWCLADLRAYVLVLLVISG

Length  20

Organism  Pleurodeles waltl (Iberian ribbed newt)

UniProt ID  Q02988,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05470.cif

Structure  SPKB05470.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2234.78644

Aliphatic index  185

Isoelectric point  6.158123832

Charge (pH=7)   -0.064397658

Topological polar surface area  771.67

Aromaticity  0.1

Average rotatable bonds  3.5

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  27

X logP energy  -0.73323

Hydropathy 



Literature Information


Title  Isolation and characterization of a cDNA clone encoding a Pleurodeles lectin.

DOI  10.1111/j.1432-1033.1993.tb17834.x,

Publication Year  1993

PubMed ID  8504829,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.