SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05446

Signal sequence   METKRLAYVMFVLVCLFLAMAQPSQA

Length  26

Organism  Pinus monticola (Western white pine) (Strobus monticola)

UniProt ID  P83880,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05446.cif

Structure  SPKB05446.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2961.65014

Aliphatic index  108.8461538

Isoelectric point  8.522883439

Charge (pH=7)   0.936635947

Topological polar surface area  1054.12

Aromaticity  0.115384615

Average rotatable bonds  3.692307692

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  39

X logP energy  -4.95953

Hydropathy 



Literature Information


Title  Analysis of bark proteins in blister rust-resistant and susceptible western white pine (Pinus monticola).

DOI  10.1093/treephys/17.10.663,

Publication Year  1997

PubMed ID  14759906,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.