SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05420

Signal sequence   MARVSELAFLLAATLAISLHMQEAGV

Length  26

Organism  Juniperus ashei (Ozark white cedar)

UniProt ID  P81295,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05420.cif

Structure  SPKB05420.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2743.27514

Aliphatic index  135.3846154

Isoelectric point  5.493087469

Charge (pH=7)   -0.907559676

Topological polar surface area  1059.78

Aromaticity  0.038461538

Average rotatable bonds  3.5

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  37

X logP energy  -7.80383

Hydropathy 



Literature Information


Title  Variable expression of pathogenesis-related protein allergen in mountain cedar (Juniperus ashei) pollen.

DOI  10.4049/jimmunol.164.4.2188,

Publication Year  2000

PubMed ID  10657673,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.