SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05400

Signal sequence   MASVKLASLIVLFATLGMFLTKNVGA

Length  26

Organism  Pisum sativum (Garden pea) (Lathyrus oleraceus)

UniProt ID  P62928,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05400.cif

Structure  SPKB05400.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2696.34544

Aliphatic index  138.8461538

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  966.87

Aromaticity  0.076923077

Average rotatable bonds  3.461538462

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  36

X logP energy  -6.0235

Hydropathy 



Literature Information


Title  Gene structure, protein structure, and regulation of the synthesis of a sulfur-rich protein in pea seeds.

DOI  NA,

Publication Year  1986

PubMed ID  3755437,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.