SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05351

Signal sequence   MKRSFIFAPGMLALSISAISNAHA

Length  24

Organism  Photorhabdus luminescens (Xenorhabdus luminescens)

UniProt ID  P40601,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05351.cif

Structure  SPKB05351.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2534.03254

Aliphatic index  102.0833333

Isoelectric point  11.65178972

Charge (pH=7)   2.088595045

Topological polar surface area  964.44

Aromaticity  0.083333333

Average rotatable bonds  3.416666667

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  35

X logP energy  -8.78943

Hydropathy 



Literature Information


Title  Phase variation in Xenorhabdus luminescens: cloning and sequencing of the lipase gene and analysis of its expression in primary and secondary phases of the bacterium.

DOI  10.1128/jb.175.6.1665-1673.1993,

Publication Year  1993

PubMed ID  8449874,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.