SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05341

Signal sequence   MKLKNTLGFAIGSIIAATSFGALA

Length  24

Organism  Pseudomonas fluorescens

UniProt ID  P37726,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05341.cif

Structure  SPKB05341.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2395.88574

Aliphatic index  118.3333333

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  908.67

Aromaticity  0.083333333

Average rotatable bonds  3.333333333

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -8.0629

Hydropathy 



Literature Information


Title  Homology of the root adhesin of Pseudomonas fluorescens OE 28.3 with porin F of P. aeruginosa and P. syringae.

DOI  10.1007/BF00292721,

Publication Year  1992

PubMed ID  1538702,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.