SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05300

Signal sequence   MVSLRLPLILLSLLAISFSCSA

Length  22

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  P29421,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  2QN4,

Predicted Structure ID  SPKB05300.cif

Structure  SPKB05300.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2347.94324

Aliphatic index  181.8181818

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  828.68

Aromaticity  0.045454545

Average rotatable bonds  3.454545455

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  31

X logP energy  -4.65363

Hydropathy 



Literature Information


Title  The amino acid sequence of a 20 kDa bifunctional subtilisin/alpha-amylase inhibitor from bran [correction of brain] of rice (Oryza sativa L.) seeds.

DOI  10.1016/0014-5793(92)80741-x,

Publication Year  1992

PubMed ID  1511747,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.