SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05284

Signal sequence   MKCPKILAALLGCAVLAGVPAMPAHA

Length  26

Organism  Pseudomonas sp. (strain SMP1)

UniProt ID  P26501,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05284.cif

Structure  SPKB05284.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2547.23504

Aliphatic index  124.2307692

Isoelectric point  8.824637362

Charge (pH=7)   1.964353891

Topological polar surface area  845.17

Aromaticity  0

Average rotatable bonds  3

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  34

X logP energy  -4.4289

Hydropathy 



Literature Information


Title  Cloning and nucleotide sequence of the isoamylase gene from a strain of Pseudomonas sp.

DOI  10.1099/00221287-135-1-37,

Publication Year  1989

PubMed ID  2778432,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.