SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05253

Signal sequence   MISATKIRSCLAACVLAAFGATGALA

Length  26

Organism  Paracoccus denitrificans

UniProt ID  P22364,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05253.cif

Structure  SPKB05253.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2511.05404

Aliphatic index  116.9230769

Isoelectric point  8.828181491

Charge (pH=7)   1.873736522

Topological polar surface area  959.66

Aromaticity  0.038461538

Average rotatable bonds  3.115384615

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  36

X logP energy  -10.17933

Hydropathy 



Literature Information


Title  Properties of Paracoccus denitrificans amicyanin.

DOI  10.1021/bi00357a020,

Publication Year  1986

PubMed ID  3718960,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.