SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05222

Signal sequence   MNIKKTAVKSALAVAAAAAALTTNVSA

Length  27

Organism  Fibrobacter succinogenes (strain ATCC 19169 / S85)

UniProt ID  P17989,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05222.cif

Structure  SPKB05222.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2587.07344

Aliphatic index  112.5925926

Isoelectric point  11.10307074

Charge (pH=7)   2.997099198

Topological polar surface area  1085.31

Aromaticity  0

Average rotatable bonds  3.185185185

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  39

X logP energy  -13.6737

Hydropathy 



Literature Information


Title  DNA sequence of a Fibrobacter succinogenes mixed-linkage beta-glucanase (1,3-1,4-beta-D-glucan 4-glucanohydrolase) gene.

DOI  10.1128/jb.172.7.3837-3841.1990,

Publication Year  1990

PubMed ID  2193918,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.