SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05188

Signal sequence   MKFFAVLALCVVGAIA

Length  16

Organism  Chironomus thummi thummi (Midge)

UniProt ID  P12550,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05188.cif

Structure  SPKB05188.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1653.11704

Aliphatic index  152.5

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  525.84

Aromaticity  0.125

Average rotatable bonds  3.25

Number of hydrogen bond donors  19

Number of hydrogen bond acceptors  20

X logP energy  -0.2151

Hydropathy 



Literature Information


Title  Hemoglobins. XXVI. Analysis of the primary structure of the dimeric insect haemoglobin CTT VIIB (Erythrocruorin) from Chironomus thummi thummi, Diptera

DOI  NA,

Publication Year  1979

PubMed ID  422121,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.