SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05187

Signal sequence   MLLNRTSFVTLFAAGMLVSALAQA

Length  24

Organism  Pseudomonas syringae pv. tomato

UniProt ID  P12376,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05187.cif

Structure  SPKB05187.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2526.05034

Aliphatic index  126.25

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  961.62

Aromaticity  0.083333333

Average rotatable bonds  3.416666667

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  34

X logP energy  -8.03593

Hydropathy 



Literature Information


Title  Copper resistance in Pseudomonas syringae mediated by periplasmic and outer membrane proteins.

DOI  10.1073/pnas.88.20.8915,

Publication Year  1991

PubMed ID  1924351,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.