SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05186

Signal sequence   MTVLNRLHVCSLLAVSSLGMLPVGVFA

Length  27

Organism  Pseudomonas syringae pv. tomato

UniProt ID  P12375,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05186.cif

Structure  SPKB05186.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2828.48544

Aliphatic index  147.7777778

Isoelectric point  8.557478416

Charge (pH=7)   1.026915363

Topological polar surface area  1025.72

Aromaticity  0.037037037

Average rotatable bonds  3.333333333

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  38

X logP energy  -7.49063

Hydropathy 



Literature Information


Title  Copper resistance in Pseudomonas syringae mediated by periplasmic and outer membrane proteins.

DOI  10.1073/pnas.88.20.8915,

Publication Year  1991

PubMed ID  1924351,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.