SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05154

Signal sequence   MKMVYLGLFLIITSCVISSG

Length  20

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DQC1,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05154.cif

Structure  SPKB05154.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2175.73104

Aliphatic index  146

Isoelectric point  8.522939048

Charge (pH=7)   0.934864135

Topological polar surface area  743.39

Aromaticity  0.1

Average rotatable bonds  3.6

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  -3.4254

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.