SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05152

Signal sequence   MEGKIIFICFLVVLLTLPELISS

Length  23

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPV6,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05152.cif

Structure  SPKB05152.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2579.23484

Aliphatic index  177.826087

Isoelectric point  4.258107901

Charge (pH=7)   -1.060735205

Topological polar surface area  856.04

Aromaticity  0.086956522

Average rotatable bonds  3.695652174

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  32

X logP energy  -0.6793

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.