SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05151

Signal sequence   MEKKIIFLCFLVALLTFPEFISS

Length  23

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPV5,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05151.cif

Structure  SPKB05151.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2690.33764

Aliphatic index  135.6521739

Isoelectric point  6.354537022

Charge (pH=7)   -0.061030239

Topological polar surface area  882.06

Aromaticity  0.173913043

Average rotatable bonds  3.826086957

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  33

X logP energy  -0.4246

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.