SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05150

Signal sequence   MKSSMAVLLVMGLIIFTLDKCYS

Length  23

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPV3,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05150.cif

Structure  SPKB05150.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2564.21324

Aliphatic index  131.3043478

Isoelectric point  8.518677839

Charge (pH=7)   0.935015586

Topological polar surface area  894.01

Aromaticity  0.086956522

Average rotatable bonds  3.782608696

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  36

X logP energy  -4.2257

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.